Insertion junction: CLIP2.057686_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057686
Chromosome:chromosome 7
Location:2387273
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g328550 VPS18 Subunit of the VPS-C complex; (1 of 1) PF05131 - Pep3/Vps18/deep orange family (Pep3_Vps18) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAGTGTCCCTTGAACTCCGACAGCAGCCGGGCGCGAGGCCAGCGCCTG
Internal bar code:TTAAATCGGTATCTATGTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:400
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GAACAGCGCTATGGGCATTG
Suggested primer 2:CCAGTCACCCCTTCCCAATC