Insertion junction: CLIP2.057687_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057687
Chromosome:plastome
Location:23105
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802273 2717054,ChreCp011,rpl23 (1 of 1) PTHR11620//PTHR11620:SF20 - 60S RIBOSOMAL PROTEIN L23A // 50S RIBOSOMAL PROTEIN L23, CHLOROPLASTIC; 50S ribosomal protein L23 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGTCATTTCTGGTACAATGTTTCTCTGCCTCTTTGGGCAAATAAACT
Internal bar code:TGGCTTGGAACTTTAATCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1817
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCAAACCAATTGGCAAGA
Suggested primer 2:GCAATGCGAGCATTACGGTT