Insertion junction: CLIP2.057690_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057690
Chromosome:chromosome 9
Location:5593728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409750 CAX2 (1 of 3) K07300 - Ca2+:H+ antiporter (chaA, CAX); CAX family cation antiporter, membrane protein outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGCGCAGCAGCCGACGCACTAACCACCGTCACCTCCTCCTCAATACCG
Internal bar code:CAAACGGCCGATGCCTTGACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4003
LEAP-Seq percent confirming:99.1228
LEAP-Seq n confirming:113
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:114

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCCTTACCCCTGAATG
Suggested primer 2:TGCGTAGTTGTGGTCACTCC