Insertion junction: CLIP2.057695_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057695
Chromosome:chromosome 12
Location:1214026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490250 (1 of 1) PTHR12658//PTHR12658:SF0 - BETA-TUBULIN COFACTOR D // TUBULIN-SPECIFIC CHAPERONE D 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAGGCTAGAGCTGCACCACGCGTTAAACTAGGCTGTCTTCGATTTCG
Internal bar code:TTCATAATATTCGTTAGACCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1103
LEAP-Seq percent confirming:59.5238
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTAGAGCTGCGGGTGAA
Suggested primer 2:GGTCGTGAGGTTTGGCTGTA