Insertion junction: CLIP2.057706_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057706
Chromosome:chromosome 10
Location:1229583
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426350 predicted protein; (1 of 2) 5.2.1.14 - Beta-carotene isomerase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGAATCGAGGTCAGACCACACTTCTTCAAAAGCAACTGGCTAATATA
Internal bar code:CCCAGGGAAAAGCGAAGGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1465
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCGCCTCTCGTAGCTAC
Suggested primer 2:CCCGTAAACAGGCAGGAAGT