Insertion junction: CLIP2.057709_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057709
Chromosome:chromosome 9
Location:1194115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401022 SNE3, UXE,UXE1 UDP-xylose-4-epimerase; (1 of 1) K12448 - UDP-arabinose 4-epimerase (UXE, uxe) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGTCAACCGAAGTGCCCAATCAAGGTCATACAGGGTAATAAGTAGTT
Internal bar code:ATTTACAGAGCGTCCAAGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:936
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGCAGAGTCAGCGAGCTG
Suggested primer 2:GGCGAACGATTGTGTATGGC