Insertion junction: CLIP2.057712_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057712
Chromosome:chromosome 7
Location:5926137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g354150 MFT22,ARSJ1 Major facilitator superfamily transporter; (1 of 82) IPR020846 - Major facilitator superfamily domain 3'UTR
Cre07.g354200 GAP2 Glyceraldehyde 3-phosphate dehydrogenase, GAPC, cytosolic; (1 of 2) 1.2.1.12 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) / Triosephosphate dehydrogenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAGTGTGTGGCGTGAGAGCCGCCTCACTCCGGTTGGCGCACGTTCTC
Internal bar code:CGTAGCGACTGGCGGCGGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2673
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTGGTTGTCGAAAGCCC
Suggested primer 2:CACACCACCCATCATCCTCC