Insertion junction: CLIP2.057718_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057718
Chromosome:chromosome 4
Location:3940636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g231222 CPN60A,CPN60 alpha Chaperonin 60A; (1 of 1) PTHR11353:SF11 - CHAPERONIN 60 SUBUNIT ALPHA 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAGCTGCAGCAACAGCGGCAGCGGGAGTTTGCGCCCGCGTCAAGGAT
Internal bar code:ATGCGGTCAAACCAGGTCCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1030
LEAP-Seq percent confirming:1.21951
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:81
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCTCTCCATCGCTCTCT
Suggested primer 2:GCAATGACGGTGCAGCATAG