Insertion junction: CLIP2.057721_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057721
Chromosome:chromosome 16
Location:7039203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674291 (1 of 30) PTHR24349//PTHR24349:SF79 - SERINE/THREONINE-PROTEIN KINASE // NITROGEN NETWORK KINASE 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTACGTGCGGGCGCGCCGTGACAGGCATTTAGGACAAGTTCCCCACCCC
Internal bar code:GAATAAGTGCAAATACAGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:64
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGTTGCATCCCTGGTGT
Suggested primer 2:TGAGCGCTGCTTGCAAAATT