Insertion junction: CLIP2.057736_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057736
Chromosome:chromosome 1
Location:3070330
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g019450 SCE3,UBC9,UBE2I,CreSCE1c (1 of 1) PTHR24067//PTHR24067:SF110//PTHR24067:SF51 - UBIQUITIN-CONJUGATING ENZYME E2 // SUBFAMILY NOT NAMED // SUMO-CONJUGATING ENZYME UBC9; SUMO-conjugating enzyme 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATAGGGCTGACGTGCGACCGTAGTACGGCATGTTTGCGACGCTACAAG
Internal bar code:ATAAGCGGGTGGAGGGGAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:58
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GACGGCGACATAAGGGAGAG
Suggested primer 2:ACAGACGGCCAAGTACAAGG