Insertion junction: CLIP2.057750_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057750
Chromosome:chromosome 17
Location:686261
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g700550 (1 of 2) IPR000210//IPR008974//IPR011333 - BTB/POZ domain // TRAF-like // POZ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGAATGTGGGACTGCGAATACGGTAACAACAAGCGCACGCCGGGAGGA
Internal bar code:GGGTGTTCCCAAGTTGAAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2729
LEAP-Seq percent confirming:74.359
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATGGGGATCAACTGCCT
Suggested primer 2:AAGCAGAAATCGCATGCAGC