Insertion junction: CLIP2.057759_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057759
Chromosome:chromosome 3
Location:1951166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155300 PHC29 (1 of 1) IPR000095//IPR024616 - CRIB domain // Pherophorin; Putative pherophorin-chlamydomonas homolog 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATCCCGTCCTCAGCCGCCTAGCGCAACCTCCTCTCCGCCGCCGTCCC
Internal bar code:CCATTATTGCGCCGGTCCTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1925
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TACTAGACGGGGGAAAGGGG
Suggested primer 2:CGCCGCATTGGGACTTTATG