Insertion junction: CLIP2.057760_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057760
Chromosome:chromosome 5
Location:1595321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234850 (1 of 1) K11841 - ubiquitin carboxyl-terminal hydrolase 10 [EC:3.4.19.12] (USP10, UBP3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACGCCTCCCTGCAGCCGGGGCCCGCTACGCATTCACTAAAGTAGCTT
Internal bar code:TGCGAGGTTATGGGCGGCGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3404
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAAACCCGCACACACACC
Suggested primer 2:CATGGTACGCAATTCGCCTG