Insertion junction: CLIP2.057766_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057766
Chromosome:chromosome 12
Location:9554024
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g540050 (1 of 12) IPR000595//IPR018490 - Cyclic nucleotide-binding domain // Cyclic nucleotide-binding-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGCAGTGGTACCACACGTACAGCTGCCGCCGGTCGCCGCCGCTGCTG
Internal bar code:TGTCACCCTAGCGTATTTCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:333
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCACCGTCTACCACTTTC
Suggested primer 2:TTGCCCAAAAGCAGCATGAC