Insertion junction: CLIP2.057769_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057769
Chromosome:chromosome 9
Location:4982778
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g405150 PUS1 RNA pseudouridine synthase; (1 of 2) PTHR11142//PTHR11142:SF0 - PSEUDOURIDYLATE SYNTHASE // TRNA PSEUDOURIDINE SYNTHASE-LIKE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCAGCCGCTTCAGCAGATACCGGCACGTTGTCAAAGCGCGCGCCACA
Internal bar code:AAGATCAGGGCAATTGCGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:82
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGGAAGTGCGCGTGTTT
Suggested primer 2:GCGATTCAGCGGACCAAATC