Insertion junction: CLIP2.057771_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057771
Chromosome:chromosome 12
Location:4916659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524100 ABH1,CBP80 mRNA cap-binding protein; (1 of 1) K12882 - nuclear cap-binding protein subunit 1 (NCBP1, CBP80) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGACGACTGTCCTACTACACCGGCCTTGCCACGGCCTTCAAACGACCG
Internal bar code:GAGCTCCACGCCCACTCTTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:595
LEAP-Seq percent confirming:79.3103
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTGGGTGATGGTGTAGG
Suggested primer 2:GATGTGGGGTTGAGGGTGAG