Insertion junction: CLIP2.057774_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057774
Chromosome:chromosome 13
Location:264632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g563733 (1 of 1) K04368 - mitogen-activated protein kinase kinase 1 (MAP2K1, MEK1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCAGTCGGGTGTATTACACGTAGATATGCCCCCGTGGAGGCAGGTGT
Internal bar code:TGTATCTTTGTAGGAACTCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1133
LEAP-Seq percent confirming:75.8621
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATGTCGCTTGGGTTTTG
Suggested primer 2:GGTTAGGCTTGCTTGGTTGC