Insertion junction: CLIP2.057777_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057777
Chromosome:chromosome 11
Location:1952460
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre11.g467779 (1 of 1) 3.2.1.52 - Beta-N-acetylhexosaminidase / N-acetyl-beta-glucosaminidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAGGTGATAATCGGGGGTGGGGATAGGTGGGGTTCGCGGGTTTGGGTG
Internal bar code:AGTGGGTGCTCACCGCTAGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:541
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAACACTGTTTTGGGCC
Suggested primer 2:AGAGCTGCAGCATGGTGATT