Insertion junction: CLIP2.057783_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057783
Chromosome:chromosome 10
Location:2323558
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g434450 NUOA9 (1 of 1) K03953 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9 (NDUFA9); NADH:ubiquinone oxidoreductase 39 kDa subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCAAACACAAAGCGACCCGCCTATCACAACCTCACCGCCCCGACGCGA
Internal bar code:TGCTGTCTGTTGGCCTGAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2278
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGCCCTTCGACTCTGTG
Suggested primer 2:AGCTCCCACCCGTTGTATTG