Insertion junction: CLIP2.057798_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057798
Chromosome:chromosome 1
Location:4216362
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g028450 (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGCAAGAGCTGTGCCGCGAGGGGGGCCGTGGGGCAGTGCAGCCCTG
Internal bar code:ACCAATTTAGAGGGGAAAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1166
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCAAGTTGCAGCCCATAT
Suggested primer 2:TGTGGACATTCAGGGATGGC