Insertion junction: CLIP2.057801_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057801
Chromosome:chromosome 2
Location:1629052
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085150 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCACAAGCAAGCTGTTATGTGCCAGTAAGTACGCAGTATTGGGCCCC
Internal bar code:GGTTAAACCGAATCAAGTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3210
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATTACCAATTGCCGGCT
Suggested primer 2:GGACGTGCAACAAGTCACAC