Insertion junction: CLIP2.057805_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057805
Chromosome:chromosome 16
Location:3779788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685929 3'UTR
Cre16.g686285 (1 of 21) IPR011016 - Zinc finger, RING-CH-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCACAATCACGAAGAGGGGAACCTGACTACGCTTACACAGACACGCTG
Internal bar code:ACTGGCATATTTCAGCCCGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2116
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAGCTGCGTGTATTGCAC
Suggested primer 2:TTCGAGTGAGTGACTTGGCC