Insertion junction: CLIP2.057813_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057813
Chromosome:chromosome 12
Location:6248849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGCTAGGCTTGTGGCTTCTTGCCTTTGGCTTCGCTGGGCTTTGCCTT
Internal bar code:GCACGGCGCCGGGCATCCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3504
LEAP-Seq percent confirming:56.6667
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAGATTGCATTGTGCCCG
Suggested primer 2:GGGGGCGGAAATCCAAGTTA