Insertion junction: CLIP2.057826_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057826
Chromosome:chromosome 6
Location:3120833
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g275450 (1 of 1) PF00069//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGGCAGAGTGGGAGGCAGCAGTCGTCGCGACGCAGCAAGGCAAGCA
Internal bar code:GTCTCACTGGCTGTCAGGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:331
LEAP-Seq percent confirming:6.06061
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCATGTGGAGAACGGGGT
Suggested primer 2:AACGGAAAACCATGCGTGTG