Insertion junction: CLIP2.057836_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057836
Chromosome:chromosome 10
Location:821640
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423250 MDN2,MDH2 Malate dehydrogenase 2; (1 of 1) PTHR11540//PTHR11540:SF27 - MALATE AND LACTATE DEHYDROGENASE // MALATE DEHYDROGENASE, GLYOXYSOMAL-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCGTGGATGTGAGGCGGCAACTGAGGCCGAGAGGCGCAACTGCATGG
Internal bar code:TACCCGTAGAGAATAAAATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3331
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACTTGCTCGTGCCTCAA
Suggested primer 2:GTCAGGCACACACGTTTGTC