Insertion junction: CLIP2.057840_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057840
Chromosome:chromosome 2
Location:6249633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387150 HSF1 (1 of 1) PTHR10015:SF162 - HEAT STRESS TRANSCRIPTION FACTOR A-1A-RELATED; Heat shock transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCAGCAGCCACGGCTGGACGCAGGCGGGGTCAACTCCATGCATACGAA
Internal bar code:GGGCAATATTCCCGCGGAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2193
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGTGGGTTAGGGACTTC
Suggested primer 2:AAGGTAGGGTCGGCATGTTG