Insertion junction: CLIP2.057841_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057841
Chromosome:chromosome 11
Location:3635044
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478240 (1 of 1) K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGTGCGAGGTGGCGGCACCCGTACCCCAGCCTTGTCTCCATCATGTA
Internal bar code:CTATCGTAACAACCGAAAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1108
LEAP-Seq percent confirming:81.0811
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGGACGGAATCGCAGAG
Suggested primer 2:GGTGTGGAGATGGAGGTGTG