Insertion junction: CLIP2.057844_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057844
Chromosome:chromosome 2
Location:3062148
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g095800 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCCTCGCCCCATCGCCTGTACATGAGTCCTAAACATTGCACCACTAC
Internal bar code:AACGCGCCGCCTACGACGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:771
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCAGGTTCTGCATGTTG
Suggested primer 2:GTGAGACACGGAAGGGAGAG