Insertion junction: CLIP2.057848_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057848
Chromosome:chromosome 11
Location:512026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467597 (1 of 1) IPR000104//IPR003439//IPR003593//IPR013525//IPR013581//IPR027417 - Antifreeze protein, type I // ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // Plant PDR ABC transporter associated // P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGCACCCCACACATCCATCCATCCTCCCACCCAACCACACAACCGGCC
Internal bar code:ATTAGAGAGCGCGGCCCTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:602
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTAACGGCATGTCGCACATC
Suggested primer 2:GGACACTAAACCGAGGTGCA