Insertion junction: CLIP2.057860_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057860
Chromosome:chromosome 7
Location:1536170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g324500 MMP22 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCAAGGAAGATGCAGTGGATGGACACGGCTGCGGCTTCTTGGTTGGA
Internal bar code:GCGGCGCAGTGGGGTGGCGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:6211
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGCGTAACGTGTACAGTT
Suggested primer 2:TGACATCATCGTGTGCACCA