Insertion junction: CLIP2.057861_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057861
Chromosome:chromosome 6
Location:8579164
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g309717 (1 of 1) PTHR12735//PTHR12735:SF22//PTHR12735:SF3 - BOLA-LIKE PROTEIN-RELATED // SUBFAMILY NOT NAMED // PROTEIN T12D8.10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACTGCTTGCATGAAGCGATCATTGCCATGTAGAGGCCAAGCCGGATTG
Internal bar code:GGCTAGCAAAAGCCCGTCATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2844
LEAP-Seq percent confirming:63.4146
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAAACCCCAAAACCCCG
Suggested primer 2:GTGTGGTTGCTGAGGTACGA