Insertion junction: CLIP2.057862_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057862
Chromosome:chromosome 1
Location:6709774
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047950 IFT27,Rabl4,FAP156 (1 of 1) K07934 - intraflagellar transport protein 27 homolog (IFT27, RAYL, RABL4); Intraflagellar transport protein 27 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTTAGGAAGAGGCTTCCGTGGAGGTTTACACGGGGCCGGTGAACGAA
Internal bar code:GCTGGCCATGTAATCGGTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3074
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AAACTTCGTGGCATACCGGT
Suggested primer 2:AGTCCTTCGAGTCGTGCAAG