Insertion junction: CLIP2.057882_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057882
Chromosome:plastome
Location:10366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802266 2716978,psbK,ChreCp004 (1 of 1) K02712 - photosystem II PsbK protein (psbK); photosystem II K protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTTTTGTCTATACACCTTAGATTTTAAAAATTTACACGCAACAAAATA
Internal bar code:TTAGGCTGAATAAACCACTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:102
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CATAGGGTCGCAGGTTCGAA
Suggested primer 2:AACCCTTTCAGGCAACCCAA