Insertion junction: CLIP2.057885_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057885
Chromosome:chromosome 7
Location:6123230
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g355700 (1 of 1) PTHR23329//PTHR23329:SF2 - TUFTELIN-INTERACTING PROTEIN 11-RELATED // ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEIN CDS
lncRNA_TCONS_00226087 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGAAGACCCGCATCCTGCAACAGCTGGCGGCAGCGGCGGCAGCAGACA
Internal bar code:TAAACAAATCGACAATTTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:545
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAAGTAGGTTCACACGCA
Suggested primer 2:AACTGTGCTGCTGTGCAATG