Insertion junction: CLIP2.057888_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057888
Chromosome:chromosome 3
Location:8252366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199800 HYD1,HYDA1 (1 of 2) 1.12.7.2 - Ferredoxin hydrogenase / Uptake hydrogenase; Iron hydrogenase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTTCCAACAGTTTACACCCCAATTCGGACGCCGCTCCAAGCTCGCTCC
Internal bar code:TGCGATGACCCTTATGTATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1816
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGCTGACAGAGGCGTTGG
Suggested primer 2:GTTTGGGTGAGCTTTGCTGG