Insertion junction: CLIP2.057900_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057900
Chromosome:chromosome 16
Location:5215400
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g684600 SEC5 (1 of 1) K17637 - exocyst complex component 2 (EXOC2, SEC5); Component of the Exocyst Complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAGCCCCTCCCGGCCCCTCTGCAGCCCCTTGCCTCCTCCGCTCTTTC
Internal bar code:TTAAGCTGATTGGCTGTAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:56
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTGGTTATGCTAACTGC
Suggested primer 2:CAGTTGCATGCCCACCTCTA