Insertion junction: CLIP2.057903_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057903
Chromosome:chromosome 6
Location:3654231
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278144 (1 of 13) PF01789 - PsbP (PsbP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCATCACTGTCTTTGCAACCTGGTGCAACCCTCCGCCCTTCTGCTGCG
Internal bar code:TCGCGGTTTTTGAAGGGTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:633
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TATCACCTTCCCCAGCGAGA
Suggested primer 2:AAGCTGCCATTACCCCCTTC