Insertion junction: CLIP2.057904_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057904
Chromosome:chromosome 9
Location:3244865
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g394806 3'UTR
Cre09.g394843 (1 of 1) PF07967 - C3HC zinc finger-like (zf-C3HC) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTTTGGCCGGGACGCATGCGCTCACATTGGTGCATTGCGCGCAAGTA
Internal bar code:GTCTCATGTTTATCTTGGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:717
LEAP-Seq percent confirming:1.83486
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:107
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTTGATGTGTCGAGGGG
Suggested primer 2:TTCCTGTACTCACGAACGGC