Insertion junction: CLIP2.057909_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057909
Chromosome:chromosome 8
Location:2480734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372300 (1 of 1) IPR000104//IPR000620 - Antifreeze protein, type I // EamA domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATCCTTGCAAGGGGGGCTGCCCGATTTTGAAGCATCTGCGCCCAAGC
Internal bar code:ATTGGAGGTTTTCGCTGATCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1097
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCGCTGTGCCACAAAAT
Suggested primer 2:TGGATGGGCTGTCAGTTGTC