Insertion junction: CLIP2.057917_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057917
Chromosome:chromosome 9
Location:1098012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401750 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCGGGCGGACCTCTAGGCGGTCGCCCAGCCGCAGGCGCATGCAGTAC
Internal bar code:AGCAGTTGTAAGGTCAAATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:3542
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAATGAATGCTGTGGGCG
Suggested primer 2:CACCGCAACCACGAATTTGT