Insertion junction: CLIP2.057922_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057922
Chromosome:chromosome 9
Location:5698602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410400 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGGTCTCCTGGACTCCACCCGACGAAACTGGGAAGCAAAGCGAGCCT
Internal bar code:ACGGATAGCCACGGTCTTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2144
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAATGCAGCCGTTTGACG
Suggested primer 2:GCTACTGTTGCTGCTGACAC