Insertion junction: CLIP2.057937_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057937
Chromosome:chromosome 9
Location:3665632
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g397142 ADF1,TRP15 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL; Acid-induced Ca transient receptor channel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACAACCCACCGCACCGCCCACCCACCTTCCCCCCCAGGTCATGTACCC
Internal bar code:ATATTGCTCCTAGTTTCGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:544
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGCGAAAACACCCCTCC
Suggested primer 2:TCCGTGGCCTTCTTCAACTC