Insertion junction: CLIP2.057940_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057940
Chromosome:chromosome 4
Location:389515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217912 (1 of 1) PTHR13035//PTHR13035:SF0 - UNCHARACTERIZED // PROTEIN N-TERMINAL GLUTAMINE AMIDOHYDROLASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGCAGCTCACGCGCAGCTTCCCAGCCGGCACCACACGCAACTGCCAG
Internal bar code:CGATCGGGCGGTGGGACAACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4152
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCGCTCCCTAGTTCAAA
Suggested primer 2:TGTCAGGAATGCCAGACCAC