Insertion junction: CLIP2.057941_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057941
Chromosome:chromosome 3
Location:8295961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800396 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGGTGCGCTGGGCGGACATGCTCTGAGATGGGGGTTGGGGGGCGGGA
Internal bar code:GGCAAATACTCAGAGTTTAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:435
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAGGTGTGCGTCATCAG
Suggested primer 2:TGCGCTGTGTGAGTGTATGT