Insertion junction: CLIP2.057945_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057945
Chromosome:chromosome 2
Location:3241659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097150 AGG5 (1 of 12) PF04749 - PLAC8 family (PLAC8); Aggregation 5 3'UTR
Cre02.g097200 SRR14 Scavenger receptor cysteine rich (SRCR) protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCGGGTGTGTAGCCAGTGCCGATGCGCCGTGTCGTGTGTGGTACGGC
Internal bar code:TGCAATCCGCTAAAAGTAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:996
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGTGTGTATGGGCAGTC
Suggested primer 2:CGGATGGACAGACACACACA