Insertion junction: CLIP2.057946_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057946
Chromosome:chromosome 13
Location:886216
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g567550 (1 of 1) IPR000719//IPR000817//IPR001245//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Prion protein // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGTTGCAAGGATTGGTACAGAGAAGTGTAGCGAAGTAGACAGCAGGG
Internal bar code:GTCTTCGTCGGTGGGGTGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:113
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACTACCACCACCACCAGTC
Suggested primer 2:ATGCACACTTCAACACACGC