Insertion junction: CLIP2.057948_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057948
Chromosome:chromosome 12
Location:5658431
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531800 FAP7 Flagellar Associated Protein 7 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTCTCTCTCCAGCGATTACTGCGTTCGTGTGCAGCAGTGCCACTTCCA
Internal bar code:TGTCGGGTGTCTCGTCGACGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:953
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACTCACAGCTGTGGTAG
Suggested primer 2:AGAGCGTTGCTGATTGGTGA