Insertion junction: CLIP2.057951_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057951
Chromosome:chromosome 2
Location:5966948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g118125 5'UTR
Cre02.g118151 5'UTR
Cre02.g118200 (1 of 3) PF01940 - Integral membrane protein DUF92 (DUF92) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCATAAAAGCACATCTCGGCTGCCGCGGCTCAGAGAACAAAGCTGAG
Internal bar code:GAGGTGAGGTGTGAACACTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2873
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCGCAAGTACATCCCCAA
Suggested primer 2:TGCTTGCAAGACGGGAAGAA