Insertion junction: CLIP2.057954_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057954
Chromosome:chromosome 4
Location:324165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217903 (1 of 1) IPR002711//IPR003615 - HNH endonuclease // HNH nuclease 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTCGTTGATGCAAGGGAGCAGACGCGTCTGTCGCGGGCAAGGGGGAAG
Internal bar code:TAGGAGCTGAGTGCGCGGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2388
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:104
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCGATAGTGTCCTCGACA
Suggested primer 2:CCACCTGCTCATACGGTTGT