Insertion junction: CLIP2.057955_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057955
Chromosome:chromosome 17
Location:5442020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738850 (1 of 1) IPR000104//IPR003169 - Antifreeze protein, type I // GYF domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAAGGTCTTGATAGCGGATAGTGGAAGTCTTGCCCGCGGCATCGCTGGG
Internal bar code:TGTCAGTTGGTTTAGCTAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3176
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAATGCACACCCGTTGCTTT
Suggested primer 2:GCCCAAAGACCACATGCATG